CDS

Accession Number TCMCG018C21556
gbkey CDS
Protein Id XP_031736808.1
Location complement(join(21853619..21854138,21861785..21861836,21861968..21862450,21862575..21862958,21863055..21863204,21863479..21863809,21863883..21864010,21865674..21865839,21865908..21865957,21866847..21866917,21867029..21867089,21873897..21874027,21879244..21879437,21902029..21902142,21902212..21902333,21902407..21902461,21902606..21902697,21903245..21903359,21903478..21903560,21910997..21911140,21911665..21911989,21912078..21912149))
Gene LOC101221910
GeneID 101221910
Organism Cucumis sativus

Protein

Length 1280aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA182750
db_source XM_031880948.1
Definition DEAD-box ATP-dependent RNA helicase FANCM isoform X3 [Cucumis sativus]

EGGNOG-MAPPER Annotation

COG_category A
Description DEAD DEAH box RNA helicase family protein
KEGG_TC -
KEGG_Module M00413        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10896        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03460        [VIEW IN KEGG]
map03460        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000712        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006260        [VIEW IN EMBL-EBI]
GO:0006261        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031297        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0036297        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043240        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045005        [VIEW IN EMBL-EBI]
GO:0045132        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051304        [VIEW IN EMBL-EBI]
GO:0051307        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071821        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGTTTAGGACGTTTCCGATGGCAACAAGTAATCGAGAATTCACTGTTGACGACAACGACGACGACGACGACTTCGACTGGGAAGCAGCCGTCAAAGAAATTGACGTGGCCAGCCTATCAGGAATTCACTCTGCTTCATCACATTCACTTCATCCTTCCCTAACGGAATCCTCCGACGCCGCTGCAGAAACTCCAGCTTCATTTCCACTTTCCGAGGAGAATGAAAAACGCGGAACTTCTCGCCAGTCTACACTTCACAGATTTATCGTGAATGCCAAGTTTCGAAAGAAAACAATGGACGTCGAAAAACCGGTTCAAGATCCCGGCCTTGTTGAAGACTCGGTTGGTCTTGTTGACATAGACGAGGAGGCAGCTAAGACCTGGATATATCCAGTTAATGTTCCTCTTCGGGATTATCAGCTGGCTATTACAAAGACAGCACTATTTTCAAATACATTGGTGGCTTTGCCTACAGGACTTGGAAAGACTCTCATTGCTGCAGTTGTTATGTATAACTACTTCAGATGGTTTCCTGAGGGCAAAATTGTATTTACTGCTCCTTCTCGACCACTGGTCTTGCAACAGATAGAAGCATGCCATAATATTGTCGGAATACCACAAGAATGGACCATTGACATGACAGGCATGATAAATCCGGCAAAAAGAGCATCTTTTTGGAGAAGTAAAAGAGTTTTCTTTGTTACACCACAAGTACTAGAGAAGGATATTCAATCAGGCACATGTTTGATGAAATACCTGGTTTGCTTAGTGATTGATGAAGCCCATCGAGCACTTGGAAATTACTCTTATTGTGTTGCAGTTCGTGAGTTAACAAAAATACCTGTGCCACTAAGAATACTAGCCTTAACTGCCACACCAGGATCAAAGCATCAGGGTATTCAGCAAATCATTGACAACTTACACATTTCAACCCTTCAATATCGTGATGAAAGTGATCATGATGTCAGTCCATATGTTCATGACAGGAAAATAGAATTGATTCAAGTCGCAATGGGAGAAGATGCTGTTGAGATAGATAATAAGCTCCTGGAAGTTATGCGACCATTTGTGGCCAAACTTCGTTCAATAGGAATACTCCAGAACAGAGATTACAGAACGTTGAGTCCATGTGATTTACTGAACTCTAGGGATAAATTTCGTCAAGCACCCCCACCAGTCCATCCACACATTAAGTATCATGACGTAGAGGGTTTCTTTGGAGTACTCATTACACTATACCATATACGTAAGTTACTTTCAAGCCATGGAATAAGGCCAGCGTCTGAGATGCTAGAAGAGAAGCTACAACAAGGGTCTTTTGCAAGATTTATGAGCAAAAATCATCATGTCTGCGAAGTGAGACTCATAATGGAGAAGAGCTTGACCCATGGTGCACCAAGTCCCAAATTGTCCAAAATGATGGAAGTATTGACCAACCATTTTAAAACGAAGGATCCACAAGATTCAAGGGTGATTATATTCTCGAATTTCAGGGGAAGTGTAAGGGACATTATGAGTGCACTATCCAAGATTGAAGACATTGTCAGAGCTACTGAGTTTATTGGTCAAAGCTCAGGAAAATCTCTCAAAGGTCAATCACAAAAGGTTCAACAGGCTGTTTTGGAGAAATTTCGTGCTGGCGGGTTCAATGTCATTGTTGCCACATGCATTGGTGAAGAAGGTCTTGATATAATGGAAGTCGATCTTGTTATCTGTTTCGATGCAAATATTTCACCAATAAGAATGATTCAGCGGATGGGTAGAACCGGAAGGAAGCATGATGGAAGAGTGGTAGTTTTAGCATGTGAAGGGTCAGAATTGAAGGGTTACATGAAAAAGCAAGCAACAAGCAAGTCTATAAAGAAGCACATGCAAAATGGGGGAGTAAATAGTTTCAACTTTCATGCTAGCTCTAGAATGATTCCACATGCTATCAGACCAGAAGTCCAGTTTGTTAAGCTGTCTATCAAACAATTTGTTCGTCCTGGAAAAAAAGTGAAAGATGATCATGCTGTTCAGATATCATTTAAGAACAAGTTAACTGATACTGAGACTCAGTTACTTCTCAAGTATTTCCATCCTTGTGACGATGCATGGCGGCCGTCCCTTATTGCCTTTCCTCACTTCCAGACTTTTCCCTCAAGAACCCATGGAGTATTGCATTCATGTAGAACAATGGTTCTGATTGACACAATGCAACACTTGCAAGGACTGCATTTTTCTAGGGAATCTGAATCATTCTCTGTTGCACAGTCAATAAATGAAGTCAACGCATCAAAAGCAGAATTAGAAGTGCCATTAGTGTATCCTGAAGTCTCACTACCCCAAAATTCTGCAGAAAACAATTGTATTTCTGGTTGCTGTTCTCCCAAACATTCTACAATAGACATCATTGGTTCAGGTAGCAAATTATTGAATTTTTCTGAGCCAGGTTCTTACTGTGTAAGAACTGCTCAGGACTTAATTGTGCCAACTGAAGCTGTCATCAAGCAGACAACTTCACAAACAAAAATCTTACCTGATGAGTTTTTTCCAAGCCCTGAAACAGATTGTGTTCCTGTCTTGGAGGACAAAGCAATGAATCTGATTGAGACAAATCATCAAAACACTCTCTTGAAGAGGATTTTTTTTAATAAAGATACTGTCGATGAAAAACTTGTTCTGGAAATCGAGCCGCAATTCACCCCGGCTGACGAATTCAGTATTACTGAGACTCAGCTTAGTCCTCGTCTCACTAATTTAATCGAGAGTGGTTTTGTACCAGATTCACCAATTGATGATTGTGGATATTCTAGACAACGGATATCTGAATCAGCAAAATCCCAGTTTATTTTGCCTGCCCAAGTGGATGGTCTACAGCTTTTAAACTCCTCAAGTTCTGGGATAAATGAAATGATTAATTGTAATGCGGGCTTTTGTGCTGGAAATGATATTTTTCTCGCAAGCAGTGAAGGTCAATCTTCTGCACTCAAGGATAATGAGAGCGTGGGTATAAAATCACATGCCCCTACATCTCCTATGGCTGATGAAATACAAACTCCCTTGGCTACTATTGCAAGCAGTTGTGATAATGAAGTTTGGGATTCAGTTAATGGAGAAAAGTTTAGCAGTGTACCGAAACCCCACAAATTCAAAAGATTGCGAAAGGTTGGAGACATGAAGAAAAATGAAAACATTGAAAGCATGGCAAAAACTTCAATTTCTCCATTGGGAAATATGGTTGGAACTTTTTCTAGCACCAGACAATTTAAAAAAAAGAAACGCGATGGTGAAAGGAGATTTGACGACAATGTTAAAGCATTTATCGAGGAGGAAGCTGAGCGTTCTTTGCTAAGTCAATCACCATTTGGGAGGTTGACTTCACCCCTAGCGACCAGGGTAACTGAAAGTGAAACTTCTCCTGACAAGACATTGAATATTTTCCAGTCAACTGTAACAGACGACGTCAATCAATCTCATACACTGCATTCAAAACATGTGAAAATGAACTGCAGCCCAGAAGTTGTAATTGCTACAATTGGTGTCTGCCCAAGGACGACAGACGTGGAAAGCATGAATAGAAATTCGACATTTTGTACATCAGAACCTGTTCCTGTACTTAATTTGGATAAACAGTTTGAGTTGGTGGTGGCAGGGAGAGAATCCATAAGCGAAGTGGATTCAAATAGAAATGTATTCATTGATGATGATGAATTTTATGAAGGTCTTGACCTTGATGCAGTTGAGGCCCATGCAAAATTGCTCCTCCAGAAGAAAGTTGAGTTGCCACAGATTATGGTTACTCAGCAACAGAAGAATATTCCTATCGACACTTCTCCATCTTTTGATCTTGGGATATGA
Protein:  
MAFRTFPMATSNREFTVDDNDDDDDFDWEAAVKEIDVASLSGIHSASSHSLHPSLTESSDAAAETPASFPLSEENEKRGTSRQSTLHRFIVNAKFRKKTMDVEKPVQDPGLVEDSVGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTKIPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTLSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKMMEVLTNHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQISFKNKLTDTETQLLLKYFHPCDDAWRPSLIAFPHFQTFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDIIGSGSKLLNFSEPGSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITETQLSPRLTNLIESGFVPDSPIDDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAERSLLSQSPFGRLTSPLATRVTESETSPDKTLNIFQSTVTDDVNQSHTLHSKHVKMNCSPEVVIATIGVCPRTTDVESMNRNSTFCTSEPVPVLNLDKQFELVVAGRESISEVDSNRNVFIDDDEFYEGLDLDAVEAHAKLLLQKKVELPQIMVTQQQKNIPIDTSPSFDLGI